Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hoxc9P09633 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hoxc9P09633 Gm12274-201ENSMUST00000120062 385 ntBASIC15.2■□□□□ 0.02
Hoxc9P09633 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC15.2■□□□□ 0.02
Hoxc9P09633 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC15.2■□□□□ 0.02
Hoxc9P09633 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC15.2■□□□□ 0.02
Hoxc9P09633 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC15.2■□□□□ 0.02
Hoxc9P09633 Gm7082-201ENSMUST00000209880 969 ntBASIC15.2■□□□□ 0.02
Hoxc9P09633 Gm18065-201ENSMUST00000221395 526 ntBASIC15.2■□□□□ 0.02
Hoxc9P09633 Gm7959-201ENSMUST00000221823 1078 ntBASIC15.2■□□□□ 0.02
Hoxc9P09633 AC153152.3-201ENSMUST00000222188 1135 ntBASIC15.2■□□□□ 0.02
Hoxc9P09633 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Hoxc9P09633 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Hoxc9P09633 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc9P09633 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC15.2■□□□□ 0.02
Hoxc9P09633 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hoxc9P09633 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc9P09633 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc9P09633 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc9P09633 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc9P09633 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc9P09633 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.2■□□□□ 0.02
Hoxc9P09633 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc9P09633 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.19■□□□□ 0.02
Hoxc9P09633 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Hoxc9P09633 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Hoxc9P09633 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Hoxc9P09633 Gm11500-201ENSMUST00000118237 601 ntBASIC15.19■□□□□ 0.02
Hoxc9P09633 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC15.19■□□□□ 0.02
Hoxc9P09633 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC15.19■□□□□ 0.02
Hoxc9P09633 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Gm24248-201ENSMUST00000157321 322 ntBASIC15.19■□□□□ 0.02
Hoxc9P09633 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Hoxc9P09633 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc9P09633 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Hoxc9P09633 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc9P09633 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc9P09633 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc9P09633 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc9P09633 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc9P09633 Gm25148-201ENSMUST00000104611 123 ntBASIC15.18■□□□□ 0.02
Hoxc9P09633 Gm6322-201ENSMUST00000118789 1004 ntBASIC15.18■□□□□ 0.02
Hoxc9P09633 Gm9673-201ENSMUST00000119287 781 ntBASIC15.18■□□□□ 0.02
Hoxc9P09633 Gm11700-201ENSMUST00000119409 403 ntBASIC15.18■□□□□ 0.02
Hoxc9P09633 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc9P09633 Gm22379-201ENSMUST00000157480 131 ntBASIC15.18■□□□□ 0.02
Hoxc9P09633 Mir7051-201ENSMUST00000184167 73 ntBASIC15.18■□□□□ 0.02
Hoxc9P09633 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc9P09633 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC15.18■□□□□ 0.02
Hoxc9P09633 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC15.18■□□□□ 0.02
Hoxc9P09633 Gm18463-201ENSMUST00000207258 474 ntBASIC15.18■□□□□ 0.02
Hoxc9P09633 Gm18460-201ENSMUST00000208088 464 ntBASIC15.18■□□□□ 0.02
Hoxc9P09633 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC15.18■□□□□ 0.02
Hoxc9P09633 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Hoxc9P09633 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc9P09633 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Hoxc9P09633 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc9P09633 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc9P09633 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc9P09633 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC15.18■□□□□ 0.02
Hoxc9P09633 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Hoxc9P09633 Gm18986-201ENSMUST00000216029 1986 ntBASIC15.18■□□□□ 0.02
Hoxc9P09633 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc9P09633 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc9P09633 Gm43773-201ENSMUST00000198548 2162 ntBASIC15.18■□□□□ 0.02
Hoxc9P09633 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc9P09633 Rab3c-202ENSMUST00000223922 2398 ntBASIC15.18■□□□□ 0.02
Hoxc9P09633 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc9P09633 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc9P09633 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc9P09633 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.18■□□□□ 0.02
Hoxc9P09633 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC15.17■□□□□ 0.02
Hoxc9P09633 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc9P09633 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Hoxc9P09633 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Hoxc9P09633 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc9P09633 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc9P09633 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc9P09633 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC15.17■□□□□ 0.02
Hoxc9P09633 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc9P09633 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms