Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm5419-201ENSMUST00000119301 527 ntBASIC11.16□□□□□ -0.62
ApoeP08226 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.16□□□□□ -0.62
ApoeP08226 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.16□□□□□ -0.62
ApoeP08226 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.16□□□□□ -0.62
ApoeP08226 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
ApoeP08226 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.16□□□□□ -0.62
ApoeP08226 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.16□□□□□ -0.62
ApoeP08226 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
ApoeP08226 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Gm9996-201ENSMUST00000070359 913 ntBASIC11.16□□□□□ -0.62
ApoeP08226 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
ApoeP08226 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
ApoeP08226 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.16□□□□□ -0.62
ApoeP08226 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.16□□□□□ -0.62
ApoeP08226 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
ApoeP08226 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
ApoeP08226 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.15□□□□□ -0.62
ApoeP08226 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.15□□□□□ -0.62
ApoeP08226 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
ApoeP08226 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
ApoeP08226 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
ApoeP08226 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.15□□□□□ -0.62
ApoeP08226 Gm12164-201ENSMUST00000121695 551 ntBASIC11.15□□□□□ -0.62
ApoeP08226 Gm11960-201ENSMUST00000122068 925 ntBASIC11.15□□□□□ -0.62
ApoeP08226 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.15□□□□□ -0.62
ApoeP08226 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.15□□□□□ -0.62
ApoeP08226 Gm29127-201ENSMUST00000188304 517 ntBASIC11.15□□□□□ -0.62
ApoeP08226 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Gm43818-201ENSMUST00000200605 466 ntBASIC11.15□□□□□ -0.62
ApoeP08226 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.15□□□□□ -0.62
ApoeP08226 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.15□□□□□ -0.62
ApoeP08226 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
ApoeP08226 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.15□□□□□ -0.62
ApoeP08226 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
ApoeP08226 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.15□□□□□ -0.62
ApoeP08226 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.15□□□□□ -0.62
ApoeP08226 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ApoeP08226 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
ApoeP08226 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
ApoeP08226 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.63
ApoeP08226 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.15□□□□□ -0.63
ApoeP08226 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
ApoeP08226 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
ApoeP08226 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
ApoeP08226 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.14□□□□□ -0.63
ApoeP08226 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.14□□□□□ -0.63
ApoeP08226 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.14□□□□□ -0.63
ApoeP08226 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
ApoeP08226 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.14□□□□□ -0.63
ApoeP08226 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.14□□□□□ -0.63
ApoeP08226 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.14□□□□□ -0.63
ApoeP08226 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.14□□□□□ -0.63
ApoeP08226 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.14□□□□□ -0.63
ApoeP08226 Gm13875-201ENSMUST00000120162 282 ntBASIC11.14□□□□□ -0.63
ApoeP08226 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.14□□□□□ -0.63
ApoeP08226 Gm16379-201ENSMUST00000161469 348 ntBASIC11.14□□□□□ -0.63
ApoeP08226 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
ApoeP08226 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms