Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Hoxa4P06798 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Hoxa4P06798 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa4P06798 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.62□□□□□ -0.55
Hoxa4P06798 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa4P06798 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa4P06798 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa4P06798 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa4P06798 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.62□□□□□ -0.55
Hoxa4P06798 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.62□□□□□ -0.55
Hoxa4P06798 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Hoxa4P06798 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.62□□□□□ -0.55
Hoxa4P06798 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa4P06798 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Hoxa4P06798 Gm7666-201ENSMUST00000146631 819 ntBASIC11.62□□□□□ -0.55
Hoxa4P06798 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.62□□□□□ -0.55
Hoxa4P06798 Gm8459-201ENSMUST00000162504 760 ntBASIC11.62□□□□□ -0.55
Hoxa4P06798 Mir5132-201ENSMUST00000175166 71 ntBASIC11.62□□□□□ -0.55
Hoxa4P06798 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Hoxa4P06798 Gm37246-201ENSMUST00000192665 835 ntBASIC11.62□□□□□ -0.55
Hoxa4P06798 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.62□□□□□ -0.55
Hoxa4P06798 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.62□□□□□ -0.55
Hoxa4P06798 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa4P06798 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Hoxa4P06798 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa4P06798 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa4P06798 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa4P06798 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa4P06798 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa4P06798 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.62□□□□□ -0.55
Hoxa4P06798 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa4P06798 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Hoxa4P06798 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Hoxa4P06798 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Hoxa4P06798 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa4P06798 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa4P06798 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa4P06798 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Hoxa4P06798 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa4P06798 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa4P06798 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.61□□□□□ -0.55
Hoxa4P06798 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa4P06798 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa4P06798 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa4P06798 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa4P06798 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Hoxa4P06798 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa4P06798 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa4P06798 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa4P06798 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa4P06798 Gm22920-201ENSMUST00000102175 109 ntBASIC11.61□□□□□ -0.55
Hoxa4P06798 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa4P06798 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Hoxa4P06798 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.61□□□□□ -0.55
Hoxa4P06798 Gm15566-201ENSMUST00000121130 590 ntBASIC11.61□□□□□ -0.55
Hoxa4P06798 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.61□□□□□ -0.55
Hoxa4P06798 B9d1os-201ENSMUST00000137010 674 ntBASIC11.61□□□□□ -0.55
Hoxa4P06798 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.61□□□□□ -0.55
Hoxa4P06798 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.61□□□□□ -0.55
Hoxa4P06798 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.61□□□□□ -0.55
Hoxa4P06798 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.61□□□□□ -0.55
Hoxa4P06798 Gm44506-201ENSMUST00000206278 965 ntBASIC11.61□□□□□ -0.55
Hoxa4P06798 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa4P06798 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.61□□□□□ -0.55
Hoxa4P06798 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.61□□□□□ -0.55
Hoxa4P06798 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Hoxa4P06798 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa4P06798 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.61□□□□□ -0.55
Hoxa4P06798 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa4P06798 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.61□□□□□ -0.55
Hoxa4P06798 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa4P06798 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa4P06798 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Hoxa4P06798 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa4P06798 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa4P06798 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.61□□□□□ -0.55
Hoxa4P06798 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa4P06798 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa4P06798 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa4P06798 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.61□□□□□ -0.55
Hoxa4P06798 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa4P06798 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.61□□□□□ -0.55
Hoxa4P06798 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa4P06798 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.61□□□□□ -0.55
Hoxa4P06798 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa4P06798 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa4P06798 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.61□□□□□ -0.55
Hoxa4P06798 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Hoxa4P06798 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.6□□□□□ -0.55
Hoxa4P06798 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Hoxa4P06798 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms