Protein–RNA interactions for Protein: P04942

Ig kappa chain V-VI region NQ5-61.1.2, mousemouse

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04942 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
P04942 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
P04942 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
P04942 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.45□□□□□ -0.9
P04942 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
P04942 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.45□□□□□ -0.9
P04942 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Gm23949-201ENSMUST00000104027 127 ntBASIC9.45□□□□□ -0.9
P04942 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.45□□□□□ -0.9
P04942 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
P04942 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.45□□□□□ -0.9
P04942 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.45□□□□□ -0.9
P04942 Gm24749-201ENSMUST00000157838 343 ntBASIC9.45□□□□□ -0.9
P04942 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC9.45□□□□□ -0.9
P04942 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
P04942 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
P04942 Gm28071-201ENSMUST00000190355 478 ntBASIC9.45□□□□□ -0.9
P04942 Gm38000-201ENSMUST00000192390 1215 ntBASIC9.45□□□□□ -0.9
P04942 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC9.45□□□□□ -0.9
P04942 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC9.45□□□□□ -0.9
P04942 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
P04942 Olfr582-201ENSMUST00000098212 960 ntBASIC9.45□□□□□ -0.9
P04942 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.45□□□□□ -0.9
P04942 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
P04942 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
P04942 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
P04942 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04942 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04942 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04942 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04942 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P04942 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04942 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04942 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
P04942 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04942 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P04942 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.44□□□□□ -0.9
P04942 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P04942 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04942 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04942 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04942 Gm23596-201ENSMUST00000104304 132 ntBASIC9.44□□□□□ -0.9
P04942 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC9.44□□□□□ -0.9
P04942 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04942 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC9.44□□□□□ -0.9
P04942 Gm12380-201ENSMUST00000119012 544 ntBASIC9.44□□□□□ -0.9
P04942 Gm15207-201ENSMUST00000119259 442 ntBASIC9.44□□□□□ -0.9
P04942 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC9.44□□□□□ -0.9
P04942 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P04942 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
P04942 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.44□□□□□ -0.9
P04942 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.44□□□□□ -0.9
P04942 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.44□□□□□ -0.9
P04942 Gm3332-201ENSMUST00000189337 928 ntBASIC9.44□□□□□ -0.9
P04942 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.44□□□□□ -0.9
P04942 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P04942 Gm43966-201ENSMUST00000203301 612 ntBASIC9.44□□□□□ -0.9
P04942 Gm44262-201ENSMUST00000204969 372 ntBASIC9.44□□□□□ -0.9
P04942 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.44□□□□□ -0.9
P04942 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC9.44□□□□□ -0.9
P04942 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC9.44□□□□□ -0.9
P04942 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms