Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P04224 Gm4034-201ENSMUST00000187674 480 ntBASIC10.36□□□□□ -0.75
P04224 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04224 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.36□□□□□ -0.75
P04224 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P04224 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04224 Gm17794-201ENSMUST00000220252 955 ntBASIC10.36□□□□□ -0.75
P04224 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04224 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
P04224 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04224 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04224 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.36□□□□□ -0.75
P04224 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P04224 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04224 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04224 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04224 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P04224 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04224 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.36□□□□□ -0.75
P04224 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
P04224 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04224 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04224 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04224 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04224 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04224 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
P04224 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.35□□□□□ -0.75
P04224 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC10.35□□□□□ -0.75
P04224 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
P04224 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.35□□□□□ -0.75
P04224 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
P04224 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.35□□□□□ -0.75
P04224 Gm22331-201ENSMUST00000158066 136 ntBASIC10.35□□□□□ -0.75
P04224 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.35□□□□□ -0.75
P04224 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.35□□□□□ -0.75
P04224 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.35□□□□□ -0.75
P04224 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.35□□□□□ -0.75
P04224 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.35□□□□□ -0.75
P04224 Gm32025-201ENSMUST00000217960 307 ntBASIC10.35□□□□□ -0.75
P04224 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.35□□□□□ -0.75
P04224 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
P04224 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
P04224 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
P04224 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
P04224 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.35□□□□□ -0.75
P04224 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04224 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.34□□□□□ -0.75
P04224 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P04224 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P04224 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.34□□□□□ -0.75
P04224 Gm8320-201ENSMUST00000177584 1762 ntBASIC10.34□□□□□ -0.75
P04224 Gm8303-201ENSMUST00000178371 1762 ntBASIC10.34□□□□□ -0.75
P04224 Gm8331-201ENSMUST00000178433 1762 ntBASIC10.34□□□□□ -0.75
P04224 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.34□□□□□ -0.75
P04224 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
P04224 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.34□□□□□ -0.75
P04224 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
P04224 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04224 Gm27331-201ENSMUST00000183705 60 ntBASIC10.34□□□□□ -0.75
P04224 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.34□□□□□ -0.75
P04224 Gm29705-201ENSMUST00000212598 474 ntBASIC10.34□□□□□ -0.75
P04224 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms