Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.14□□□□□ -0.47
CopeO89079 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.14□□□□□ -0.47
CopeO89079 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.14□□□□□ -0.47
CopeO89079 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CopeO89079 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CopeO89079 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.13□□□□□ -0.47
CopeO89079 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CopeO89079 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.13□□□□□ -0.47
CopeO89079 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.13□□□□□ -0.47
CopeO89079 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Gm45784-201ENSMUST00000188360 142 ntBASIC12.13□□□□□ -0.47
CopeO89079 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.13□□□□□ -0.47
CopeO89079 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.13□□□□□ -0.47
CopeO89079 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CopeO89079 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
CopeO89079 BC043934-202ENSMUST00000185694 2356 ntBASIC12.13□□□□□ -0.47
CopeO89079 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.13□□□□□ -0.47
CopeO89079 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CopeO89079 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CopeO89079 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CopeO89079 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
CopeO89079 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CopeO89079 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.12□□□□□ -0.47
CopeO89079 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.12□□□□□ -0.47
CopeO89079 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CopeO89079 Gm14660-201ENSMUST00000119809 575 ntBASIC12.12□□□□□ -0.47
CopeO89079 Gm11960-201ENSMUST00000122068 925 ntBASIC12.12□□□□□ -0.47
CopeO89079 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 Gm8602-201ENSMUST00000184045 607 ntBASIC12.12□□□□□ -0.47
CopeO89079 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CopeO89079 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.12□□□□□ -0.47
CopeO89079 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.12□□□□□ -0.47
CopeO89079 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.12□□□□□ -0.47
CopeO89079 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CopeO89079 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.12□□□□□ -0.47
CopeO89079 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CopeO89079 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.12□□□□□ -0.47
CopeO89079 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.12□□□□□ -0.47
CopeO89079 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
CopeO89079 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
CopeO89079 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CopeO89079 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
CopeO89079 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CopeO89079 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.11□□□□□ -0.47
CopeO89079 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CopeO89079 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms