Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.72□□□□□ -0.53
Ldb2O55203 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.72□□□□□ -0.53
Ldb2O55203 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.72□□□□□ -0.53
Ldb2O55203 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ldb2O55203 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.72□□□□□ -0.53
Ldb2O55203 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.72□□□□□ -0.53
Ldb2O55203 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.72□□□□□ -0.53
Ldb2O55203 Gm28686-201ENSMUST00000187404 609 ntBASIC11.72□□□□□ -0.53
Ldb2O55203 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.72□□□□□ -0.53
Ldb2O55203 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.72□□□□□ -0.53
Ldb2O55203 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Ldb2O55203 Gm18212-201ENSMUST00000211678 889 ntBASIC11.72□□□□□ -0.53
Ldb2O55203 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.72□□□□□ -0.53
Ldb2O55203 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.72□□□□□ -0.53
Ldb2O55203 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ldb2O55203 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.72□□□□□ -0.53
Ldb2O55203 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ldb2O55203 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb2O55203 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.71□□□□□ -0.53
Ldb2O55203 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb2O55203 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.71□□□□□ -0.53
Ldb2O55203 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb2O55203 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb2O55203 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb2O55203 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb2O55203 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb2O55203 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Ldb2O55203 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb2O55203 Gm14277-201ENSMUST00000121195 360 ntBASIC11.71□□□□□ -0.53
Ldb2O55203 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.71□□□□□ -0.53
Ldb2O55203 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.71□□□□□ -0.53
Ldb2O55203 Gm26461-201ENSMUST00000175064 290 ntBASIC11.71□□□□□ -0.53
Ldb2O55203 Mir5132-201ENSMUST00000175166 71 ntBASIC11.71□□□□□ -0.53
Ldb2O55203 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ldb2O55203 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.71□□□□□ -0.53
Ldb2O55203 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ldb2O55203 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ldb2O55203 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Ldb2O55203 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ldb2O55203 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.71□□□□□ -0.54
Ldb2O55203 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ldb2O55203 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ldb2O55203 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ldb2O55203 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ldb2O55203 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.7□□□□□ -0.54
Ldb2O55203 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ldb2O55203 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ldb2O55203 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ldb2O55203 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ldb2O55203 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ldb2O55203 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Ldb2O55203 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Ldb2O55203 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ldb2O55203 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ldb2O55203 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ldb2O55203 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ldb2O55203 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ldb2O55203 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ldb2O55203 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ldb2O55203 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.7□□□□□ -0.54
Ldb2O55203 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Ldb2O55203 Gm8566-201ENSMUST00000120174 465 ntBASIC11.7□□□□□ -0.54
Ldb2O55203 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.7□□□□□ -0.54
Ldb2O55203 Gm24990-201ENSMUST00000157406 323 ntBASIC11.7□□□□□ -0.54
Ldb2O55203 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ldb2O55203 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ldb2O55203 Gm16505-201ENSMUST00000179981 232 ntBASIC11.7□□□□□ -0.54
Ldb2O55203 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ldb2O55203 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.7□□□□□ -0.54
Ldb2O55203 Gm5982-201ENSMUST00000196234 512 ntBASIC11.7□□□□□ -0.54
Ldb2O55203 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ldb2O55203 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.7□□□□□ -0.54
Ldb2O55203 Gm18730-201ENSMUST00000218038 343 ntBASIC11.7□□□□□ -0.54
Ldb2O55203 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.7□□□□□ -0.54
Ldb2O55203 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ldb2O55203 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ldb2O55203 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ldb2O55203 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ldb2O55203 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ldb2O55203 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ldb2O55203 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ldb2O55203 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms