Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.97□□□□□ -0.33
Trdmt1O55055 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trdmt1O55055 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.97□□□□□ -0.33
Trdmt1O55055 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Trdmt1O55055 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Trdmt1O55055 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.97□□□□□ -0.33
Trdmt1O55055 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trdmt1O55055 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trdmt1O55055 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trdmt1O55055 Gm10263-201ENSMUST00000085163 300 ntBASIC12.97□□□□□ -0.33
Trdmt1O55055 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trdmt1O55055 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trdmt1O55055 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.97□□□□□ -0.33
Trdmt1O55055 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdmt1O55055 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trdmt1O55055 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.96□□□□□ -0.33
Trdmt1O55055 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trdmt1O55055 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Trdmt1O55055 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trdmt1O55055 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trdmt1O55055 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trdmt1O55055 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trdmt1O55055 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trdmt1O55055 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trdmt1O55055 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.96□□□□□ -0.33
Trdmt1O55055 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.96□□□□□ -0.33
Trdmt1O55055 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
Trdmt1O55055 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.96□□□□□ -0.33
Trdmt1O55055 Gm9135-201ENSMUST00000182963 990 ntBASIC12.96□□□□□ -0.33
Trdmt1O55055 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.96□□□□□ -0.33
Trdmt1O55055 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.96□□□□□ -0.33
Trdmt1O55055 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.96□□□□□ -0.33
Trdmt1O55055 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.96□□□□□ -0.33
Trdmt1O55055 Gm5996-201ENSMUST00000211110 718 ntBASIC12.96□□□□□ -0.33
Trdmt1O55055 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.96□□□□□ -0.33
Trdmt1O55055 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.96□□□□□ -0.33
Trdmt1O55055 Gm30671-201ENSMUST00000214898 318 ntBASIC12.96□□□□□ -0.33
Trdmt1O55055 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.96□□□□□ -0.33
Trdmt1O55055 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.96□□□□□ -0.33
Trdmt1O55055 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trdmt1O55055 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trdmt1O55055 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trdmt1O55055 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trdmt1O55055 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trdmt1O55055 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trdmt1O55055 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trdmt1O55055 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trdmt1O55055 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trdmt1O55055 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trdmt1O55055 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.96□□□□□ -0.34
Trdmt1O55055 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trdmt1O55055 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.95□□□□□ -0.34
Trdmt1O55055 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trdmt1O55055 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.95□□□□□ -0.34
Trdmt1O55055 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Gm14807-201ENSMUST00000116640 983 ntBASIC12.95□□□□□ -0.34
Trdmt1O55055 Gm11980-201ENSMUST00000121445 986 ntBASIC12.95□□□□□ -0.34
Trdmt1O55055 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.95□□□□□ -0.34
Trdmt1O55055 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.95□□□□□ -0.34
Trdmt1O55055 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.95□□□□□ -0.34
Trdmt1O55055 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.95□□□□□ -0.34
Trdmt1O55055 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.95□□□□□ -0.34
Trdmt1O55055 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.95□□□□□ -0.34
Trdmt1O55055 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.95□□□□□ -0.34
Trdmt1O55055 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.95□□□□□ -0.34
Trdmt1O55055 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.95□□□□□ -0.34
Trdmt1O55055 Gm43163-201ENSMUST00000196571 442 ntBASIC12.95□□□□□ -0.34
Trdmt1O55055 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.95□□□□□ -0.34
Trdmt1O55055 Gm35713-201ENSMUST00000210516 199 ntBASIC12.95□□□□□ -0.34
Trdmt1O55055 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trdmt1O55055 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.95□□□□□ -0.34
Trdmt1O55055 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.95□□□□□ -0.34
Trdmt1O55055 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.95□□□□□ -0.34
Trdmt1O55055 Gm5468-202ENSMUST00000227851 682 ntBASIC12.95□□□□□ -0.34
Trdmt1O55055 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms