Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Npc1O35604 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.54□□□□□ -0.56
Npc1O35604 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Npc1O35604 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.54□□□□□ -0.56
Npc1O35604 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Npc1O35604 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npc1O35604 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npc1O35604 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npc1O35604 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npc1O35604 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.54□□□□□ -0.56
Npc1O35604 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Npc1O35604 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Npc1O35604 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npc1O35604 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npc1O35604 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npc1O35604 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.54□□□□□ -0.56
Npc1O35604 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.53□□□□□ -0.56
Npc1O35604 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.53□□□□□ -0.56
Npc1O35604 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.53□□□□□ -0.56
Npc1O35604 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.53□□□□□ -0.56
Npc1O35604 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.53□□□□□ -0.56
Npc1O35604 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.53□□□□□ -0.56
Npc1O35604 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Npc1O35604 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Npc1O35604 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.53□□□□□ -0.56
Npc1O35604 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Npc1O35604 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Npc1O35604 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
Npc1O35604 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.53□□□□□ -0.56
Npc1O35604 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.53□□□□□ -0.56
Npc1O35604 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.53□□□□□ -0.56
Npc1O35604 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.53□□□□□ -0.56
Npc1O35604 Gm8100-201ENSMUST00000182906 988 ntBASIC11.53□□□□□ -0.56
Npc1O35604 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Gm19287-201ENSMUST00000203190 358 ntBASIC11.53□□□□□ -0.56
Npc1O35604 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.53□□□□□ -0.56
Npc1O35604 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.53□□□□□ -0.56
Npc1O35604 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Npc1O35604 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.53□□□□□ -0.56
Npc1O35604 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Npc1O35604 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.53□□□□□ -0.56
Npc1O35604 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Npc1O35604 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Npc1O35604 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Npc1O35604 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Npc1O35604 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Npc1O35604 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Npc1O35604 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Npc1O35604 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Npc1O35604 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Npc1O35604 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.52□□□□□ -0.56
Npc1O35604 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Npc1O35604 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Npc1O35604 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Npc1O35604 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Npc1O35604 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Npc1O35604 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npc1O35604 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npc1O35604 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Npc1O35604 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npc1O35604 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npc1O35604 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.52□□□□□ -0.57
Npc1O35604 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Npc1O35604 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Npc1O35604 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.52□□□□□ -0.57
Npc1O35604 Gm9062-201ENSMUST00000117712 727 ntBASIC11.52□□□□□ -0.57
Npc1O35604 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.52□□□□□ -0.57
Npc1O35604 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Npc1O35604 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npc1O35604 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.52□□□□□ -0.57
Npc1O35604 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms