Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.33□□□□□ -0.92
Efnb3O35393 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Efnb3O35393 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.33□□□□□ -0.92
Efnb3O35393 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Efnb3O35393 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.33□□□□□ -0.92
Efnb3O35393 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.33□□□□□ -0.92
Efnb3O35393 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC9.33□□□□□ -0.92
Efnb3O35393 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.33□□□□□ -0.92
Efnb3O35393 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Efnb3O35393 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Efnb3O35393 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.32□□□□□ -0.92
Efnb3O35393 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.32□□□□□ -0.92
Efnb3O35393 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Dctn4-202ENSMUST00000223590 1530 ntBASIC9.32□□□□□ -0.92
Efnb3O35393 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.32□□□□□ -0.92
Efnb3O35393 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Efnb3O35393 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
Efnb3O35393 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Efnb3O35393 Gm12742-201ENSMUST00000117326 410 ntBASIC9.32□□□□□ -0.92
Efnb3O35393 Gm14999-201ENSMUST00000121039 624 ntBASIC9.32□□□□□ -0.92
Efnb3O35393 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Rprl1-201ENSMUST00000158050 327 ntBASIC9.32□□□□□ -0.92
Efnb3O35393 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC9.32□□□□□ -0.92
Efnb3O35393 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC9.32□□□□□ -0.92
Efnb3O35393 Mir7085-201ENSMUST00000184353 66 ntBASIC9.32□□□□□ -0.92
Efnb3O35393 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Efnb3O35393 Gm38241-201ENSMUST00000192641 898 ntBASIC9.32□□□□□ -0.92
Efnb3O35393 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC9.32□□□□□ -0.92
Efnb3O35393 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.32□□□□□ -0.92
Efnb3O35393 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC9.32□□□□□ -0.92
Efnb3O35393 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC9.32□□□□□ -0.92
Efnb3O35393 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.32□□□□□ -0.92
Efnb3O35393 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.32□□□□□ -0.92
Efnb3O35393 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Efnb3O35393 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.32□□□□□ -0.92
Efnb3O35393 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.32□□□□□ -0.92
Efnb3O35393 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Efnb3O35393 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Efnb3O35393 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Efnb3O35393 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Efnb3O35393 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Efnb3O35393 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.31□□□□□ -0.92
Efnb3O35393 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC9.31□□□□□ -0.92
Efnb3O35393 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Efnb3O35393 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
Efnb3O35393 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.31□□□□□ -0.92
Efnb3O35393 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.31□□□□□ -0.92
Efnb3O35393 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Efnb3O35393 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Efnb3O35393 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Efnb3O35393 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Efnb3O35393 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Efnb3O35393 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms