Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ndufb11O09111 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ndufb11O09111 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC9.36□□□□□ -0.91
Ndufb11O09111 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ndufb11O09111 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ndufb11O09111 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.36□□□□□ -0.91
Ndufb11O09111 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Ndufb11O09111 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC9.35□□□□□ -0.91
Ndufb11O09111 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC9.35□□□□□ -0.91
Ndufb11O09111 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Gm22121-201ENSMUST00000175148 54 ntBASIC9.35□□□□□ -0.91
Ndufb11O09111 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC9.35□□□□□ -0.91
Ndufb11O09111 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Ndufb11O09111 Gm42693-201ENSMUST00000196779 631 ntBASIC9.35□□□□□ -0.91
Ndufb11O09111 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC9.35□□□□□ -0.91
Ndufb11O09111 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC9.35□□□□□ -0.91
Ndufb11O09111 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC9.35□□□□□ -0.91
Ndufb11O09111 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Ndufb11O09111 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Ndufb11O09111 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.35□□□□□ -0.91
Ndufb11O09111 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Ndufb11O09111 Gm15544-201ENSMUST00000118776 1531 ntBASIC9.35□□□□□ -0.91
Ndufb11O09111 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.35□□□□□ -0.91
Ndufb11O09111 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ndufb11O09111 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Ndufb11O09111 AC131029.1-201ENSMUST00000226391 2929 ntBASIC9.35□□□□□ -0.91
Ndufb11O09111 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.34□□□□□ -0.91
Ndufb11O09111 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Gm13517-201ENSMUST00000120782 1495 ntBASIC9.34□□□□□ -0.91
Ndufb11O09111 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Ndufb11O09111 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
Ndufb11O09111 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Ndufb11O09111 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Gm24830-201ENSMUST00000102024 166 ntBASIC9.34□□□□□ -0.91
Ndufb11O09111 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC9.34□□□□□ -0.91
Ndufb11O09111 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.34□□□□□ -0.91
Ndufb11O09111 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Ndufb11O09111 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC9.34□□□□□ -0.91
Ndufb11O09111 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Gm27622-201ENSMUST00000183779 60 ntBASIC9.34□□□□□ -0.91
Ndufb11O09111 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC9.34□□□□□ -0.91
Ndufb11O09111 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC9.34□□□□□ -0.91
Ndufb11O09111 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Gm26232-201ENSMUST00000083360 166 ntBASIC9.34□□□□□ -0.91
Ndufb11O09111 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.34□□□□□ -0.91
Ndufb11O09111 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Ndufb11O09111 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
Ndufb11O09111 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.34□□□□□ -0.91
Ndufb11O09111 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ndufb11O09111 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
Ndufb11O09111 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms