Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.63□□□□□ -0.71
Pcdh1F7BJK1 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Pcdh1F7BJK1 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.63□□□□□ -0.71
Pcdh1F7BJK1 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pcdh1F7BJK1 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pcdh1F7BJK1 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pcdh1F7BJK1 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Pcdh1F7BJK1 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pcdh1F7BJK1 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pcdh1F7BJK1 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pcdh1F7BJK1 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Pcdh1F7BJK1 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pcdh1F7BJK1 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Pcdh1F7BJK1 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pcdh1F7BJK1 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pcdh1F7BJK1 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pcdh1F7BJK1 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Rgr-203ENSMUST00000225070 4704 ntBASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Gm25857-201ENSMUST00000082788 129 ntBASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Btrc-209ENSMUST00000224478 2194 ntBASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.62□□□□□ -0.71
Pcdh1F7BJK1 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms