Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm13426-201ENSMUST00000117887 795 ntBASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm20493-201ENSMUST00000173706 213 ntBASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Ighv5-1-201ENSMUST00000193324 353 ntBASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm43117-201ENSMUST00000198531 379 ntBASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 BB187690-201ENSMUST00000198619 1176 ntBASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm29689-201ENSMUST00000221076 589 ntBASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Krtap6-3-201ENSMUST00000079151 444 ntBASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 n-R5s71-201ENSMUST00000093668 119 ntBASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ccdc188F6WEU2 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 AC158777.1-201ENSMUST00000226216 1724 ntBASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Gm22661-201ENSMUST00000104192 132 ntBASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Gm7815-201ENSMUST00000196104 832 ntBASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc188F6WEU2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 126.9 ms