Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Gm13916-201ENSMUST00000117368 628 ntBASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Gm15003-201ENSMUST00000118884 446 ntBASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Gm11942-201ENSMUST00000180255 345 ntBASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Gm5870-201ENSMUST00000196461 282 ntBASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.31□□□□□ -0.28
Syngap1F6SEU4 CT573086.4-201ENSMUST00000226729 342 ntBASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Gm23045-201ENSMUST00000175041 96 ntBASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Gm10731-201ENSMUST00000181171 448 ntBASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Gm8531-201ENSMUST00000188319 893 ntBASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syngap1F6SEU4 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Gm26286-201ENSMUST00000104166 134 ntBASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Gm8756-201ENSMUST00000183250 929 ntBASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms