Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cpsf4lE9Q2N0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cpsf4lE9Q2N0 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cpsf4lE9Q2N0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cpsf4lE9Q2N0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cpsf4lE9Q2N0 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cpsf4lE9Q2N0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cpsf4lE9Q2N0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Cpsf4lE9Q2N0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cpsf4lE9Q2N0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cpsf4lE9Q2N0 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cpsf4lE9Q2N0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cpsf4lE9Q2N0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Cpsf4lE9Q2N0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Cpsf4lE9Q2N0 AC122860.2-201ENSMUST00000217967 2671 ntBASIC9.98□□□□□ -0.81
Cpsf4lE9Q2N0 AC113441.2-201ENSMUST00000221538 1468 ntBASIC9.98□□□□□ -0.81
Cpsf4lE9Q2N0 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Gm12217-201ENSMUST00000118858 696 ntBASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Gm8100-201ENSMUST00000182906 988 ntBASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Gm21811-201ENSMUST00000096485 930 ntBASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 AC159308.2-201ENSMUST00000213592 2325 ntBASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cpsf4lE9Q2N0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.81
Cpsf4lE9Q2N0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cpsf4lE9Q2N0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Cpsf4lE9Q2N0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cpsf4lE9Q2N0 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cpsf4lE9Q2N0 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cpsf4lE9Q2N0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cpsf4lE9Q2N0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cpsf4lE9Q2N0 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Cpsf4lE9Q2N0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cpsf4lE9Q2N0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC9.96□□□□□ -0.81
Cpsf4lE9Q2N0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cpsf4lE9Q2N0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cpsf4lE9Q2N0 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cpsf4lE9Q2N0 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms