Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a3E9PWQ3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Gm5510-201ENSMUST00000117826 486 ntBASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Gm15329-201ENSMUST00000121408 155 ntBASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Gm43761-201ENSMUST00000202132 991 ntBASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 AC114585.2-201ENSMUST00000227693 486 ntBASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Olfr649-201ENSMUST00000060440 939 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Gm20281-201ENSMUST00000188225 267 ntBASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Gm7589-201ENSMUST00000085631 534 ntBASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a3E9PWQ3 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.4□□□□□ -0.59
Col6a3E9PWQ3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a3E9PWQ3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a3E9PWQ3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.59
Col6a3E9PWQ3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a3E9PWQ3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a3E9PWQ3 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a3E9PWQ3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a3E9PWQ3 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.4□□□□□ -0.59
Col6a3E9PWQ3 Gm12254-201ENSMUST00000134617 471 ntBASIC11.4□□□□□ -0.59
Col6a3E9PWQ3 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.4□□□□□ -0.59
Col6a3E9PWQ3 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.4□□□□□ -0.59
Col6a3E9PWQ3 Gm42402-201ENSMUST00000208341 1054 ntBASIC11.4□□□□□ -0.59
Col6a3E9PWQ3 CT009713.2-201ENSMUST00000225532 1149 ntBASIC11.4□□□□□ -0.59
Col6a3E9PWQ3 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a3E9PWQ3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC11.4□□□□□ -0.59
Col6a3E9PWQ3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Gm25947-201ENSMUST00000180343 110 ntBASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Fuom-202ENSMUST00000120034 680 ntTSL 3 BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a3E9PWQ3 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms