Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gng5-ps-201ENSMUST00000120931 205 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm16459-201ENSMUST00000121443 686 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm15982-201ENSMUST00000121681 554 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Mir432-201ENSMUST00000157230 75 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm17221-201ENSMUST00000163909 481 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm17073-201ENSMUST00000168069 556 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm19246-201ENSMUST00000173599 255 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm4903-201ENSMUST00000210462 405 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm9166-201ENSMUST00000120293 561 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm19927-201ENSMUST00000185792 781 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm45527-201ENSMUST00000211052 774 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Gm6331-201ENSMUST00000217890 450 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 AC169511.1-201ENSMUST00000227639 995 ntBASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Col4a6B1AVK5 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Gm12461-201ENSMUST00000120231 1239 ntBASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Gm37197-201ENSMUST00000195607 401 ntBASIC11.9□□□□□ -0.5
Col4a6B1AVK5 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms