Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Gm38577-201ENSMUST00000221531 4545 ntBASIC9.49□□□□□ -0.89
Chd6A3KFM7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd6A3KFM7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Gm7940-201ENSMUST00000218195 769 ntBASIC9.48□□□□□ -0.89
Chd6A3KFM7 Nsmce2-203ENSMUST00000227173 1122 ntBASIC9.48□□□□□ -0.89
Chd6A3KFM7 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 AC132833.1-202ENSMUST00000228875 1690 ntBASIC9.48□□□□□ -0.89
Chd6A3KFM7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Gm15549-201ENSMUST00000121595 622 ntBASIC9.48□□□□□ -0.89
Chd6A3KFM7 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Gm38151-201ENSMUST00000195085 289 ntBASIC9.48□□□□□ -0.89
Chd6A3KFM7 Gm44304-201ENSMUST00000200509 145 ntBASIC9.48□□□□□ -0.89
Chd6A3KFM7 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Gm5421-201ENSMUST00000181698 2354 ntBASIC9.48□□□□□ -0.89
Chd6A3KFM7 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chd6A3KFM7 Gm12240-201ENSMUST00000120178 229 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm42751-201ENSMUST00000198065 559 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm5738-201ENSMUST00000206016 779 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 AC134913.2-201ENSMUST00000225017 771 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 AC102847.1-202ENSMUST00000226313 1245 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm45638-201ENSMUST00000211507 2878 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm8464-202ENSMUST00000146697 1142 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm4750-201ENSMUST00000151942 1142 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm15664-201ENSMUST00000160167 184 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm27316-201ENSMUST00000184884 277 ntBASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms