Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.3□□□□□ -0.44
Scn1aA2APX8 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gm12029-201ENSMUST00000120073 832 ntBASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gm14460-201ENSMUST00000121511 639 ntBASIC12.3□□□□□ -0.44
Scn1aA2APX8 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Scn1aA2APX8 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gm18065-201ENSMUST00000221395 526 ntBASIC12.3□□□□□ -0.44
Scn1aA2APX8 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.29□□□□□ -0.44
Scn1aA2APX8 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.29□□□□□ -0.44
Scn1aA2APX8 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Scn1aA2APX8 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.29□□□□□ -0.44
Scn1aA2APX8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.29□□□□□ -0.44
Scn1aA2APX8 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Cog3-203ENSMUST00000227473 4197 ntBASIC12.29□□□□□ -0.44
Scn1aA2APX8 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.29□□□□□ -0.44
Scn1aA2APX8 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1aA2APX8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Gm23272-201ENSMUST00000104053 129 ntBASIC12.28□□□□□ -0.44
Scn1aA2APX8 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Gm22138-201ENSMUST00000158748 128 ntBASIC12.28□□□□□ -0.44
Scn1aA2APX8 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Gm9463-201ENSMUST00000206707 601 ntBASIC12.28□□□□□ -0.44
Scn1aA2APX8 Gm17825-201ENSMUST00000206836 794 ntBASIC12.28□□□□□ -0.44
Scn1aA2APX8 Gm8342-201ENSMUST00000209839 757 ntBASIC12.28□□□□□ -0.44
Scn1aA2APX8 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.28□□□□□ -0.44
Scn1aA2APX8 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms