Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Gm23270-201ENSMUST00000104055 131 ntBASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Gm27046-201ENSMUST00000182160 463 ntBASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Gm9368-201ENSMUST00000219348 831 ntBASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Gm10478-201ENSMUST00000084451 396 ntBASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc194A0A140LIT1 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Gm11930-201ENSMUST00000117788 190 ntBASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Gm2991-201ENSMUST00000173338 480 ntBASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Gm19287-201ENSMUST00000203190 358 ntBASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc194A0A140LIT1 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc194A0A140LIT1 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc194A0A140LIT1 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms