Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Gm13297-201ENSMUST00000120205 934 ntBASIC9.66□□□□□ -0.86
Trav18A0A075B656 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.66□□□□□ -0.86
Trav18A0A075B656 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC9.66□□□□□ -0.86
Trav18A0A075B656 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Gm9230-201ENSMUST00000188228 532 ntBASIC9.66□□□□□ -0.86
Trav18A0A075B656 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav18A0A075B656 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.66□□□□□ -0.86
Trav18A0A075B656 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 AC131068.2-201ENSMUST00000226175 1453 ntBASIC9.66□□□□□ -0.86
Trav18A0A075B656 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.65□□□□□ -0.86
Trav18A0A075B656 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC9.65□□□□□ -0.86
Trav18A0A075B656 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Gm12957-201ENSMUST00000117835 377 ntBASIC9.65□□□□□ -0.86
Trav18A0A075B656 Trav4d-2-201ENSMUST00000120914 335 ntBASIC9.65□□□□□ -0.86
Trav18A0A075B656 Gm15547-201ENSMUST00000122152 333 ntBASIC9.65□□□□□ -0.86
Trav18A0A075B656 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Gm6114-201ENSMUST00000182472 968 ntBASIC9.65□□□□□ -0.86
Trav18A0A075B656 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Trav18A0A075B656 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav18A0A075B656 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav18A0A075B656 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav18A0A075B656 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav18A0A075B656 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
Trav18A0A075B656 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Trav18A0A075B656 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav18A0A075B656 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Trav18A0A075B656 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Trav18A0A075B656 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav18A0A075B656 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav18A0A075B656 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav18A0A075B656 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
Trav18A0A075B656 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav18A0A075B656 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav18A0A075B656 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms