Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Gm9996-201ENSMUST00000070359 913 ntBASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Mir433-201ENSMUST00000093564 124 ntBASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.16□□□□□ -0.62
Trim3Q9R1R2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.15□□□□□ -0.62
Trim3Q9R1R2 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Gm19994-201ENSMUST00000217086 586 ntBASIC11.15□□□□□ -0.62
Trim3Q9R1R2 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.15□□□□□ -0.62
Trim3Q9R1R2 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim3Q9R1R2 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Trim3Q9R1R2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim3Q9R1R2 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim3Q9R1R2 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.63
Trim3Q9R1R2 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim3Q9R1R2 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.15□□□□□ -0.63
Trim3Q9R1R2 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim3Q9R1R2 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trim3Q9R1R2 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim3Q9R1R2 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Gm13296-201ENSMUST00000117854 997 ntBASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms