Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Ccl28Q9JIL2 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Gm5419-201ENSMUST00000119301 527 ntBASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Gm8712-201ENSMUST00000221090 701 ntBASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 AC154252.2-201ENSMUST00000223593 767 ntBASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.52□□□□□ -0.89
Ccl28Q9JIL2 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Gm2128-201ENSMUST00000108009 2560 ntBASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Gm11989-201ENSMUST00000117240 672 ntBASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Gm11362-201ENSMUST00000118838 850 ntBASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Gm14441-201ENSMUST00000121960 540 ntBASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Gm30285-201ENSMUST00000214614 422 ntBASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Gm5186-201ENSMUST00000218781 920 ntBASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Ccl28Q9JIL2 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Ccl28Q9JIL2 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl28Q9JIL2 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC9.5□□□□□ -0.89
Ccl28Q9JIL2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Ccl28Q9JIL2 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms