Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne8Q9DC53 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cpne8Q9DC53 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne8Q9DC53 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Gm11511-201ENSMUST00000118146 540 ntBASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Gm14381-201ENSMUST00000122105 414 ntBASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Gm5616-201ENSMUST00000165252 384 ntBASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Gm8741-201ENSMUST00000174736 384 ntBASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Gm44364-201ENSMUST00000198368 141 ntBASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Gm19287-201ENSMUST00000203190 358 ntBASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Gm8913-201ENSMUST00000209491 641 ntBASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Cpne8Q9DC53 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Cpne8Q9DC53 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cpne8Q9DC53 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpne8Q9DC53 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpne8Q9DC53 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpne8Q9DC53 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cpne8Q9DC53 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpne8Q9DC53 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpne8Q9DC53 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpne8Q9DC53 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpne8Q9DC53 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cpne8Q9DC53 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Cpne8Q9DC53 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpne8Q9DC53 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cpne8Q9DC53 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpne8Q9DC53 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Gm13296-201ENSMUST00000117854 997 ntBASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Gm20482-202ENSMUST00000174729 825 ntBASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Gm4310-201ENSMUST00000177847 889 ntBASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Gm6082-201ENSMUST00000215204 454 ntBASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Gm9797-202ENSMUST00000218003 294 ntBASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpne8Q9DC53 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpne8Q9DC53 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cpne8Q9DC53 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpne8Q9DC53 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpne8Q9DC53 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpne8Q9DC53 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpne8Q9DC53 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpne8Q9DC53 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpne8Q9DC53 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cpne8Q9DC53 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Cpne8Q9DC53 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpne8Q9DC53 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cpne8Q9DC53 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpne8Q9DC53 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpne8Q9DC53 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Cpne8Q9DC53 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Cpne8Q9DC53 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cpne8Q9DC53 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms