Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.9□□□□□ -0.5
Sf3a3Q9D554 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.9□□□□□ -0.5
Sf3a3Q9D554 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.9□□□□□ -0.5
Sf3a3Q9D554 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3a3Q9D554 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Sf3a3Q9D554 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3a3Q9D554 Gm5867-201ENSMUST00000063197 592 ntBASIC11.9□□□□□ -0.5
Sf3a3Q9D554 Gm26232-201ENSMUST00000083360 166 ntBASIC11.9□□□□□ -0.5
Sf3a3Q9D554 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.9□□□□□ -0.5
Sf3a3Q9D554 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3a3Q9D554 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.9□□□□□ -0.5
Sf3a3Q9D554 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.9□□□□□ -0.5
Sf3a3Q9D554 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3a3Q9D554 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sf3a3Q9D554 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Sf3a3Q9D554 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Sf3a3Q9D554 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sf3a3Q9D554 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sf3a3Q9D554 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sf3a3Q9D554 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Gm13612-201ENSMUST00000119276 390 ntBASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Gm12036-201ENSMUST00000120008 530 ntBASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.88□□□□□ -0.51
Sf3a3Q9D554 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.88□□□□□ -0.51
Sf3a3Q9D554 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms