Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.17□□□□□ -0.62
Upk1aQ9D132 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk1aQ9D132 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk1aQ9D132 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.17□□□□□ -0.62
Upk1aQ9D132 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk1aQ9D132 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Upk1aQ9D132 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk1aQ9D132 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Upk1aQ9D132 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
Upk1aQ9D132 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Upk1aQ9D132 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.16□□□□□ -0.62
Upk1aQ9D132 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Gm25043-201ENSMUST00000158604 212 ntBASIC11.16□□□□□ -0.62
Upk1aQ9D132 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Upk1aQ9D132 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.16□□□□□ -0.62
Upk1aQ9D132 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.16□□□□□ -0.62
Upk1aQ9D132 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk1aQ9D132 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.15□□□□□ -0.62
Upk1aQ9D132 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.15□□□□□ -0.62
Upk1aQ9D132 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Gm2546-201ENSMUST00000182630 991 ntBASIC11.15□□□□□ -0.62
Upk1aQ9D132 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.15□□□□□ -0.62
Upk1aQ9D132 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.15□□□□□ -0.62
Upk1aQ9D132 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Upk1aQ9D132 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms