Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Gm12164-201ENSMUST00000121695 551 ntBASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc80Q9D0F1 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Gm6082-201ENSMUST00000215204 454 ntBASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc80Q9D0F1 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc80Q9D0F1 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc80Q9D0F1 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.03□□□□□ -0.48
Ndc80Q9D0F1 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc80Q9D0F1 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.03□□□□□ -0.48
Ndc80Q9D0F1 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc80Q9D0F1 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc80Q9D0F1 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.03□□□□□ -0.48
Ndc80Q9D0F1 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Ndc80Q9D0F1 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms