Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Gm11814-201ENSMUST00000119515 929 ntBASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Gm14999-201ENSMUST00000121039 624 ntBASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Gm12138-201ENSMUST00000122180 951 ntBASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Gm27839-201ENSMUST00000184242 106 ntBASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Gm27486-201ENSMUST00000184923 80 ntBASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Gm42442-201ENSMUST00000197951 1133 ntBASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Gm45059-201ENSMUST00000205558 1077 ntBASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Gm6091-201ENSMUST00000098307 165 ntBASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Gm8706-201ENSMUST00000197372 1491 ntBASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Zscan30-202ENSMUST00000224144 1458 ntBASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC9.58□□□□□ -0.88
Hdhd3Q9CYW4 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Gm6222-202ENSMUST00000182143 629 ntBASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Gm27847-201ENSMUST00000183711 107 ntBASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Gm27375-201ENSMUST00000183799 107 ntBASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Gm27682-201ENSMUST00000183930 110 ntBASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Gtpbp10-211ENSMUST00000198799 648 ntBASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Gm18584-201ENSMUST00000203098 964 ntBASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hdhd3Q9CYW4 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hdhd3Q9CYW4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC9.56□□□□□ -0.88
Hdhd3Q9CYW4 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hdhd3Q9CYW4 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.56□□□□□ -0.88
Hdhd3Q9CYW4 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms