Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Gm11500-201ENSMUST00000118237 601 ntBASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Gm12791-201ENSMUST00000120788 655 ntBASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Gm25554-201ENSMUST00000158075 113 ntBASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Gm25830-201ENSMUST00000158923 132 ntBASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Gm42433-201ENSMUST00000196806 940 ntBASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Gm4978-201ENSMUST00000071565 801 ntBASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldnd1Q9CQX5 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Grk6-205ENSMUST00000224653 2976 ntBASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Gm12663-201ENSMUST00000118481 958 ntBASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Gm14395-201ENSMUST00000120494 563 ntBASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Gm37852-201ENSMUST00000193027 350 ntBASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Gm5996-201ENSMUST00000211110 718 ntBASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 123.4 ms