Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Syt7-204ENSMUST00000223586 1344 ntBASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Gm23935-201ENSMUST00000102303 57 ntBASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Gm24270-201ENSMUST00000102326 57 ntBASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Gm9083-201ENSMUST00000120423 819 ntBASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Gm11637-201ENSMUST00000120601 592 ntBASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Gm12151-201ENSMUST00000121374 290 ntBASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Gm16479-201ENSMUST00000121706 932 ntBASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Gm24245-201ENSMUST00000157318 57 ntBASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTRAFQ9CQE8 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 AC125117.1-201ENSMUST00000228121 468 ntBASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms