Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Gm25053-202ENSMUST00000199731 132 ntBASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Gm7192-201ENSMUST00000210793 1137 ntBASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Gm6564-201ENSMUST00000075377 619 ntBASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col25a1Q99MQ5 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Gm12663-201ENSMUST00000118481 958 ntBASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Gm15707-201ENSMUST00000118804 996 ntBASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Gm13281-201ENSMUST00000120871 567 ntBASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Gm8342-201ENSMUST00000209839 757 ntBASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Gm7082-201ENSMUST00000209880 969 ntBASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Gm3635-201ENSMUST00000212314 354 ntBASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col25a1Q99MQ5 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Gm14892-201ENSMUST00000117636 267 ntBASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Gm5395-201ENSMUST00000121650 915 ntBASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Gm18367-201ENSMUST00000176139 600 ntBASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Gm29499-201ENSMUST00000189151 486 ntBASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Gm28329-201ENSMUST00000191208 689 ntBASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Gm29171-201ENSMUST00000191397 486 ntBASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Gm44124-201ENSMUST00000204159 472 ntBASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.29□□□□□ -0.44
Col25a1Q99MQ5 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms