Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Gm11930-201ENSMUST00000117788 190 ntBASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Gzmn-202ENSMUST00000225535 989 ntBASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Mir877-201ENSMUST00000104738 85 ntBASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Gm9230-201ENSMUST00000188228 532 ntBASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Gm18711-201ENSMUST00000199341 750 ntBASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp1b1Q99LU0 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms