Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.48□□□□□ -0.41
Clp1Q99LI9 Gm19587-201ENSMUST00000191395 545 ntBASIC12.48□□□□□ -0.41
Clp1Q99LI9 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.48□□□□□ -0.41
Clp1Q99LI9 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.48□□□□□ -0.41
Clp1Q99LI9 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.48□□□□□ -0.41
Clp1Q99LI9 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.48□□□□□ -0.41
Clp1Q99LI9 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Gm30671-201ENSMUST00000214898 318 ntBASIC12.48□□□□□ -0.41
Clp1Q99LI9 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.48□□□□□ -0.41
Clp1Q99LI9 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Gm4978-201ENSMUST00000071565 801 ntBASIC12.48□□□□□ -0.41
Clp1Q99LI9 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clp1Q99LI9 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clp1Q99LI9 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.47□□□□□ -0.41
Clp1Q99LI9 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Map1b-203ENSMUST00000223725 2669 ntBASIC12.47□□□□□ -0.41
Clp1Q99LI9 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Gm42651-201ENSMUST00000199851 1339 ntBASIC12.47□□□□□ -0.41
Clp1Q99LI9 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Gm26989-201ENSMUST00000182608 749 ntBASIC12.47□□□□□ -0.41
Clp1Q99LI9 Mir6923-201ENSMUST00000184592 72 ntBASIC12.47□□□□□ -0.41
Clp1Q99LI9 Gm37436-201ENSMUST00000193842 1085 ntBASIC12.47□□□□□ -0.41
Clp1Q99LI9 Gm43778-201ENSMUST00000199438 199 ntBASIC12.47□□□□□ -0.41
Clp1Q99LI9 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.47□□□□□ -0.41
Clp1Q99LI9 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.47□□□□□ -0.41
Clp1Q99LI9 AC155266.1-201ENSMUST00000220762 904 ntBASIC12.47□□□□□ -0.41
Clp1Q99LI9 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.47□□□□□ -0.41
Clp1Q99LI9 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.47□□□□□ -0.41
Clp1Q99LI9 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clp1Q99LI9 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clp1Q99LI9 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.46□□□□□ -0.41
Clp1Q99LI9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.46□□□□□ -0.41
Clp1Q99LI9 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.46□□□□□ -0.41
Clp1Q99LI9 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.46□□□□□ -0.41
Clp1Q99LI9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Gm25053-201ENSMUST00000103982 133 ntBASIC12.46□□□□□ -0.41
Clp1Q99LI9 Gm25922-201ENSMUST00000104281 130 ntBASIC12.46□□□□□ -0.41
Clp1Q99LI9 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.46□□□□□ -0.41
Clp1Q99LI9 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Gm12036-201ENSMUST00000120008 530 ntBASIC12.46□□□□□ -0.41
Clp1Q99LI9 Gm5257-201ENSMUST00000121823 790 ntBASIC12.46□□□□□ -0.41
Clp1Q99LI9 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Gm22146-201ENSMUST00000157397 288 ntBASIC12.46□□□□□ -0.41
Clp1Q99LI9 Gm24679-201ENSMUST00000158762 111 ntBASIC12.46□□□□□ -0.41
Clp1Q99LI9 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms