Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gm5070-201ENSMUST00000177599 862 ntBASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gm6114-201ENSMUST00000182472 968 ntBASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Gm8885-201ENSMUST00000189382 598 ntBASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Gm6334-201ENSMUST00000207083 228 ntBASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Gm45598-202ENSMUST00000210719 986 ntBASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cstf3Q99LI7 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms