Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm12194-201ENSMUST00000117756 1012 ntBASIC14.56□□□□□ -0.08
RtcbQ99LF4 Gm12179-201ENSMUST00000118344 1272 ntBASIC14.56□□□□□ -0.08
RtcbQ99LF4 Gm13445-201ENSMUST00000121664 307 ntBASIC14.56□□□□□ -0.08
RtcbQ99LF4 Gm12453-201ENSMUST00000121981 331 ntBASIC14.56□□□□□ -0.08
RtcbQ99LF4 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Gm17070-201ENSMUST00000170463 784 ntBASIC14.56□□□□□ -0.08
RtcbQ99LF4 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC14.56□□□□□ -0.08
RtcbQ99LF4 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Gm42655-201ENSMUST00000202782 1134 ntBASIC14.56□□□□□ -0.08
RtcbQ99LF4 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Gm8894-201ENSMUST00000074642 666 ntBASIC14.56□□□□□ -0.08
RtcbQ99LF4 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Cog3-203ENSMUST00000227473 4197 ntBASIC14.56□□□□□ -0.08
RtcbQ99LF4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.55□□□□□ -0.08
RtcbQ99LF4 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Gm18798-201ENSMUST00000187264 1700 ntBASIC14.55□□□□□ -0.08
RtcbQ99LF4 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.55□□□□□ -0.08
RtcbQ99LF4 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Gm13019-201ENSMUST00000120000 276 ntBASIC14.55□□□□□ -0.08
RtcbQ99LF4 Gm14441-201ENSMUST00000121960 540 ntBASIC14.55□□□□□ -0.08
RtcbQ99LF4 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC14.55□□□□□ -0.08
RtcbQ99LF4 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Gm8197-202ENSMUST00000193422 934 ntBASIC14.55□□□□□ -0.08
RtcbQ99LF4 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RtcbQ99LF4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.55□□□□□ -0.08
RtcbQ99LF4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RtcbQ99LF4 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Gm12712-201ENSMUST00000120676 801 ntBASIC14.54□□□□□ -0.08
RtcbQ99LF4 Gm15549-201ENSMUST00000121595 622 ntBASIC14.54□□□□□ -0.08
RtcbQ99LF4 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Gm6548-201ENSMUST00000167498 1165 ntBASIC14.54□□□□□ -0.08
RtcbQ99LF4 Gm9507-202ENSMUST00000180157 654 ntBASIC14.54□□□□□ -0.08
RtcbQ99LF4 Gm4895-201ENSMUST00000181646 1137 ntBASIC14.54□□□□□ -0.08
RtcbQ99LF4 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms