Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Gm13296-201ENSMUST00000117854 997 ntBASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Gm25668-201ENSMUST00000157700 129 ntBASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Gm7584-201ENSMUST00000175829 940 ntBASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pcdha8Q91Y12 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdha8Q91Y12 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdha8Q91Y12 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.52□□□□□ -0.56
Pcdha8Q91Y12 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.52□□□□□ -0.56
Pcdha8Q91Y12 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdha8Q91Y12 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdha8Q91Y12 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdha8Q91Y12 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.52□□□□□ -0.56
Pcdha8Q91Y12 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Gm18893-201ENSMUST00000198416 943 ntBASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Gm43962-201ENSMUST00000203898 190 ntBASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdha8Q91Y12 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Gm11511-201ENSMUST00000118146 540 ntBASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Gm5455-201ENSMUST00000058710 715 ntBASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms