Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.73□□□□□ -0.53
Vsx1Q91V10 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.73□□□□□ -0.53
Vsx1Q91V10 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.73□□□□□ -0.53
Vsx1Q91V10 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.73□□□□□ -0.53
Vsx1Q91V10 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vsx1Q91V10 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Gm22711-201ENSMUST00000116890 133 ntBASIC11.72□□□□□ -0.53
Vsx1Q91V10 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.72□□□□□ -0.53
Vsx1Q91V10 Gm8815-201ENSMUST00000173809 620 ntBASIC11.72□□□□□ -0.53
Vsx1Q91V10 Gm29499-201ENSMUST00000189151 486 ntBASIC11.72□□□□□ -0.53
Vsx1Q91V10 Gm28329-201ENSMUST00000191208 689 ntBASIC11.72□□□□□ -0.53
Vsx1Q91V10 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Gm29171-201ENSMUST00000191397 486 ntBASIC11.72□□□□□ -0.53
Vsx1Q91V10 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Gm45500-201ENSMUST00000211676 803 ntBASIC11.72□□□□□ -0.53
Vsx1Q91V10 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Vsx1Q91V10 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.72□□□□□ -0.53
Vsx1Q91V10 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vsx1Q91V10 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.71□□□□□ -0.53
Vsx1Q91V10 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.71□□□□□ -0.53
Vsx1Q91V10 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.71□□□□□ -0.53
Vsx1Q91V10 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.71□□□□□ -0.53
Vsx1Q91V10 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.71□□□□□ -0.53
Vsx1Q91V10 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.71□□□□□ -0.53
Vsx1Q91V10 Gm9630-201ENSMUST00000178304 885 ntBASIC11.71□□□□□ -0.53
Vsx1Q91V10 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vsx1Q91V10 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms