Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Gm11380-201ENSMUST00000118067 560 ntBASIC13.7□□□□□ -0.22
StrcQ8VIM6 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Gm27444-201ENSMUST00000184157 137 ntBASIC13.7□□□□□ -0.22
StrcQ8VIM6 Gm8226-201ENSMUST00000190511 798 ntBASIC13.7□□□□□ -0.22
StrcQ8VIM6 Gm37688-201ENSMUST00000195195 465 ntBASIC13.7□□□□□ -0.22
StrcQ8VIM6 Gm44498-201ENSMUST00000199509 111 ntBASIC13.7□□□□□ -0.22
StrcQ8VIM6 Gm43866-201ENSMUST00000203894 839 ntBASIC13.7□□□□□ -0.22
StrcQ8VIM6 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Gm3926-201ENSMUST00000223378 1123 ntBASIC13.7□□□□□ -0.22
StrcQ8VIM6 AC154477.1-201ENSMUST00000226515 773 ntBASIC13.7□□□□□ -0.22
StrcQ8VIM6 AC137842.2-201ENSMUST00000227734 797 ntBASIC13.7□□□□□ -0.22
StrcQ8VIM6 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Gm8873-201ENSMUST00000217847 1439 ntBASIC13.7□□□□□ -0.22
StrcQ8VIM6 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Gm11952-201ENSMUST00000121172 821 ntBASIC13.69□□□□□ -0.22
StrcQ8VIM6 Gm14006-201ENSMUST00000122132 981 ntBASIC13.69□□□□□ -0.22
StrcQ8VIM6 Gm5976-201ENSMUST00000180794 996 ntBASIC13.69□□□□□ -0.22
StrcQ8VIM6 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.69□□□□□ -0.22
StrcQ8VIM6 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.69□□□□□ -0.22
StrcQ8VIM6 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.69□□□□□ -0.22
StrcQ8VIM6 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.69□□□□□ -0.22
StrcQ8VIM6 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC13.69□□□□□ -0.22
StrcQ8VIM6 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Gm11919-201ENSMUST00000117609 721 ntBASIC13.69□□□□□ -0.22
StrcQ8VIM6 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
StrcQ8VIM6 AC124613.1-201ENSMUST00000198711 88 ntBASIC13.69□□□□□ -0.22
StrcQ8VIM6 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.69□□□□□ -0.22
StrcQ8VIM6 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
StrcQ8VIM6 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
StrcQ8VIM6 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC13.68□□□□□ -0.22
StrcQ8VIM6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Gm5944-201ENSMUST00000118182 1001 ntBASIC13.68□□□□□ -0.22
StrcQ8VIM6 Gm8659-201ENSMUST00000120024 1084 ntBASIC13.68□□□□□ -0.22
StrcQ8VIM6 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Gm9574-201ENSMUST00000173127 845 ntBASIC13.68□□□□□ -0.22
StrcQ8VIM6 Snord55-201ENSMUST00000174939 79 ntBASIC13.68□□□□□ -0.22
StrcQ8VIM6 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Gm7880-201ENSMUST00000203748 871 ntBASIC13.68□□□□□ -0.22
StrcQ8VIM6 Gm45258-201ENSMUST00000210042 853 ntBASIC13.68□□□□□ -0.22
StrcQ8VIM6 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC13.68□□□□□ -0.22
StrcQ8VIM6 AC107752.1-201ENSMUST00000219362 469 ntBASIC13.68□□□□□ -0.22
StrcQ8VIM6 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms