Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Gm44364-201ENSMUST00000198368 141 ntBASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Gm43630-201ENSMUST00000201550 776 ntBASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Gm45598-202ENSMUST00000210719 986 ntBASIC9.91□□□□□ -0.82
H1fooQ8VIK3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
H1fooQ8VIK3 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Gm11661-201ENSMUST00000121761 1327 ntBASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 AC164426.2-201ENSMUST00000225993 2492 ntBASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Gm14441-201ENSMUST00000121960 540 ntBASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Gm7895-201ENSMUST00000187459 1173 ntBASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Gm44651-201ENSMUST00000207343 372 ntBASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 AC153954.1-201ENSMUST00000216959 255 ntBASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Gm18615-201ENSMUST00000222919 1031 ntBASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
H1fooQ8VIK3 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms