Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Gm11956-201ENSMUST00000119525 512 ntBASIC12.7□□□□□ -0.38
TraipQ8VIG6 Gm12029-201ENSMUST00000120073 832 ntBASIC12.7□□□□□ -0.38
TraipQ8VIG6 Gm8215-201ENSMUST00000120627 990 ntBASIC12.7□□□□□ -0.38
TraipQ8VIG6 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Gm3150-201ENSMUST00000166418 204 ntBASIC12.7□□□□□ -0.38
TraipQ8VIG6 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.7□□□□□ -0.38
TraipQ8VIG6 Gm12407-201ENSMUST00000180219 324 ntBASIC12.7□□□□□ -0.38
TraipQ8VIG6 Gm38151-201ENSMUST00000195085 289 ntBASIC12.7□□□□□ -0.38
TraipQ8VIG6 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.7□□□□□ -0.38
TraipQ8VIG6 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.7□□□□□ -0.38
TraipQ8VIG6 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.7□□□□□ -0.38
TraipQ8VIG6 AC125539.1-201ENSMUST00000227423 622 ntBASIC12.7□□□□□ -0.38
TraipQ8VIG6 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.7□□□□□ -0.38
TraipQ8VIG6 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.7□□□□□ -0.38
TraipQ8VIG6 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Gm15573-201ENSMUST00000119487 540 ntBASIC12.69□□□□□ -0.38
TraipQ8VIG6 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.69□□□□□ -0.38
TraipQ8VIG6 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Mir8093-201ENSMUST00000185043 137 ntBASIC12.69□□□□□ -0.38
TraipQ8VIG6 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Gm9136-201ENSMUST00000193368 454 ntBASIC12.69□□□□□ -0.38
TraipQ8VIG6 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Gm9132-201ENSMUST00000210182 832 ntBASIC12.69□□□□□ -0.38
TraipQ8VIG6 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.69□□□□□ -0.38
TraipQ8VIG6 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.69□□□□□ -0.38
TraipQ8VIG6 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.69□□□□□ -0.38
TraipQ8VIG6 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.69□□□□□ -0.38
TraipQ8VIG6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.69□□□□□ -0.38
TraipQ8VIG6 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
TraipQ8VIG6 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TraipQ8VIG6 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TraipQ8VIG6 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TraipQ8VIG6 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TraipQ8VIG6 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.68□□□□□ -0.38
TraipQ8VIG6 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TraipQ8VIG6 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TraipQ8VIG6 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TraipQ8VIG6 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.68□□□□□ -0.38
TraipQ8VIG6 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TraipQ8VIG6 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TraipQ8VIG6 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TraipQ8VIG6 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.68□□□□□ -0.38
TraipQ8VIG6 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TraipQ8VIG6 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TraipQ8VIG6 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TraipQ8VIG6 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TraipQ8VIG6 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TraipQ8VIG6 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.68□□□□□ -0.38
TraipQ8VIG6 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TraipQ8VIG6 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms