Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Gm12857-201ENSMUST00000117678 592 ntBASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Gm26461-201ENSMUST00000175064 290 ntBASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Gm11450-201ENSMUST00000121144 333 ntBASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Mir5120-201ENSMUST00000175020 78 ntBASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Gm18827-201ENSMUST00000188341 790 ntBASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Gm2553-201ENSMUST00000215986 605 ntBASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rprd1aQ8VDS4 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.18□□□□□ -0.46
Rprd1aQ8VDS4 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rprd1aQ8VDS4 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rprd1aQ8VDS4 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Rprd1aQ8VDS4 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rprd1aQ8VDS4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rprd1aQ8VDS4 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms