Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Btrc-209ENSMUST00000224478 2194 ntBASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Gm37737-201ENSMUST00000195013 1638 ntBASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Gm5419-201ENSMUST00000119301 527 ntBASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Gm12164-201ENSMUST00000121695 551 ntBASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Gm12138-201ENSMUST00000122180 951 ntBASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Gm8801-201ENSMUST00000173255 1064 ntBASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Gm25927-201ENSMUST00000175058 117 ntBASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Gm44799-201ENSMUST00000207639 1202 ntBASIC9.61□□□□□ -0.87
Nup35Q8R4R6 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Lect2-202ENSMUST00000225183 823 ntBASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.61□□□□□ -0.87
Nup35Q8R4R6 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Gm44415-201ENSMUST00000204151 2112 ntBASIC9.61□□□□□ -0.87
Nup35Q8R4R6 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Gm43622-201ENSMUST00000200140 2019 ntBASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Gm13875-201ENSMUST00000120162 282 ntBASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Gm16379-201ENSMUST00000161469 348 ntBASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms