Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rftn2Q8CHX7 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rftn2Q8CHX7 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rftn2Q8CHX7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Rftn2Q8CHX7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rftn2Q8CHX7 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Gm14460-201ENSMUST00000121511 639 ntBASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Mir8115-201ENSMUST00000184992 119 ntBASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Gm38314-201ENSMUST00000195709 625 ntBASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Gm9463-201ENSMUST00000206707 601 ntBASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rftn2Q8CHX7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rftn2Q8CHX7 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rftn2Q8CHX7 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rftn2Q8CHX7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rftn2Q8CHX7 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rftn2Q8CHX7 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Rftn2Q8CHX7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rftn2Q8CHX7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rftn2Q8CHX7 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rftn2Q8CHX7 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rftn2Q8CHX7 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rftn2Q8CHX7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rftn2Q8CHX7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rftn2Q8CHX7 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Gm44980-201ENSMUST00000205826 314 ntBASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Gm18065-201ENSMUST00000221395 526 ntBASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rftn2Q8CHX7 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms