Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf1Q8CFK2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Gm17040-202ENSMUST00000170597 889 ntBASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Gm6450-201ENSMUST00000200896 574 ntBASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf1Q8CFK2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Gm8566-201ENSMUST00000120174 465 ntBASIC14.23□□□□□ -0.13
Brf1Q8CFK2 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Gm38314-201ENSMUST00000195709 625 ntBASIC14.23□□□□□ -0.13
Brf1Q8CFK2 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Brf1Q8CFK2 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf1Q8CFK2 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf1Q8CFK2 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Brf1Q8CFK2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf1Q8CFK2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Brf1Q8CFK2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Brf1Q8CFK2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms