Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Gm14247-201ENSMUST00000120950 237 ntBASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Gm9002-201ENSMUST00000178437 499 ntBASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Gm43002-201ENSMUST00000200310 155 ntBASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc28bQ8CEG5 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Gm14928-201ENSMUST00000120198 477 ntBASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Gm27682-201ENSMUST00000183930 110 ntBASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms