Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Gm7722-201ENSMUST00000120646 741 ntBASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lysmd4Q8CC84 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Gm17150-201ENSMUST00000165577 381 ntBASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Gm8602-201ENSMUST00000184045 607 ntBASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms