Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm29199-201ENSMUST00000187766 775 ntBASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 Gm2965-201ENSMUST00000198365 343 ntBASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Atg4aQ8C9S8 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Gm12217-201ENSMUST00000118858 696 ntBASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Gm11783-201ENSMUST00000119549 885 ntBASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Gm4482-201ENSMUST00000200876 742 ntBASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4aQ8C9S8 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Gm12579-201ENSMUST00000118040 783 ntBASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Gm8815-201ENSMUST00000173809 620 ntBASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Gm5852-201ENSMUST00000194119 1021 ntBASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Rps4l-202ENSMUST00000204242 789 ntBASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Gm10254-201ENSMUST00000052888 867 ntBASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4aQ8C9S8 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4aQ8C9S8 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.29□□□□□ -0.12
Atg4aQ8C9S8 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4aQ8C9S8 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4aQ8C9S8 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms