Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm23949-201ENSMUST00000104027 127 ntBASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm28937-201ENSMUST00000185413 695 ntBASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm29400-201ENSMUST00000187208 695 ntBASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm28662-201ENSMUST00000188446 695 ntBASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm28251-201ENSMUST00000188835 695 ntBASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm28071-201ENSMUST00000190355 478 ntBASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm37318-201ENSMUST00000194325 695 ntBASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm38117-201ENSMUST00000194653 939 ntBASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm38017-201ENSMUST00000194768 695 ntBASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm37287-201ENSMUST00000195449 695 ntBASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm37793-201ENSMUST00000195548 695 ntBASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm18038-201ENSMUST00000197900 485 ntBASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm43002-201ENSMUST00000200310 155 ntBASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm26448-201ENSMUST00000082446 203 ntBASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Gm15711-201ENSMUST00000118889 535 ntBASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Mir7677-201ENSMUST00000184226 67 ntBASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.16□□□□□ -0.46
Trub1Q8C0D0 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trub1Q8C0D0 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms