Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Usp47Q8BY87 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp47Q8BY87 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Usp47Q8BY87 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp47Q8BY87 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Gm11244-201ENSMUST00000121243 237 ntBASIC16.6■□□□□ 0.25
Usp47Q8BY87 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Gm6485-201ENSMUST00000160676 439 ntBASIC16.6■□□□□ 0.25
Usp47Q8BY87 Gm37981-201ENSMUST00000194280 535 ntBASIC16.6■□□□□ 0.25
Usp47Q8BY87 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Snora73b-201ENSMUST00000083419 205 ntBASIC16.6■□□□□ 0.25
Usp47Q8BY87 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Gm43727-201ENSMUST00000198021 2647 ntBASIC16.6■□□□□ 0.25
Usp47Q8BY87 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp47Q8BY87 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Gm19817-201ENSMUST00000199764 2132 ntBASIC16.59■□□□□ 0.25
Usp47Q8BY87 Gm13722-201ENSMUST00000117964 3066 ntBASIC16.59■□□□□ 0.25
Usp47Q8BY87 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Usp47Q8BY87 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Gm23771-201ENSMUST00000178702 110 ntBASIC16.59■□□□□ 0.25
Usp47Q8BY87 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Gm3508-201ENSMUST00000186012 792 ntBASIC16.59■□□□□ 0.25
Usp47Q8BY87 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Usp47Q8BY87 CT009546.1-201ENSMUST00000222573 1120 ntBASIC16.59■□□□□ 0.25
Usp47Q8BY87 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Gm5879-201ENSMUST00000089501 1209 ntBASIC16.59■□□□□ 0.25
Usp47Q8BY87 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp47Q8BY87 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Usp47Q8BY87 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Usp47Q8BY87 AC166574.4-201ENSMUST00000227165 1937 ntBASIC16.58■□□□□ 0.25
Usp47Q8BY87 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Usp47Q8BY87 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Usp47Q8BY87 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Usp47Q8BY87 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Usp47Q8BY87 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC16.58■□□□□ 0.24
Usp47Q8BY87 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp47Q8BY87 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp47Q8BY87 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Usp47Q8BY87 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp47Q8BY87 Gm23272-201ENSMUST00000104053 129 ntBASIC16.58■□□□□ 0.24
Usp47Q8BY87 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp47Q8BY87 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC16.58■□□□□ 0.24
Usp47Q8BY87 Gm12247-201ENSMUST00000117585 670 ntBASIC16.58■□□□□ 0.24
Usp47Q8BY87 Gm9089-201ENSMUST00000122027 526 ntBASIC16.58■□□□□ 0.24
Usp47Q8BY87 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Usp47Q8BY87 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC16.58■□□□□ 0.24
Usp47Q8BY87 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC16.58■□□□□ 0.24
Usp47Q8BY87 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp47Q8BY87 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC16.58■□□□□ 0.24
Usp47Q8BY87 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC16.58■□□□□ 0.24
Usp47Q8BY87 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC16.58■□□□□ 0.24
Usp47Q8BY87 Gm5542-201ENSMUST00000195485 1089 ntBASIC16.58■□□□□ 0.24
Usp47Q8BY87 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Usp47Q8BY87 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC16.58■□□□□ 0.24
Usp47Q8BY87 Gm44551-201ENSMUST00000208804 171 ntBASIC16.58■□□□□ 0.24
Usp47Q8BY87 CT485606.1-201ENSMUST00000213187 878 ntBASIC16.58■□□□□ 0.24
Usp47Q8BY87 D9Wsu149-201ENSMUST00000214169 594 ntBASIC16.58■□□□□ 0.24
Usp47Q8BY87 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp47Q8BY87 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC16.58■□□□□ 0.24
Usp47Q8BY87 Gm5451-201ENSMUST00000080545 579 ntBASIC16.58■□□□□ 0.24
Usp47Q8BY87 AC164702.1-201ENSMUST00000220135 2212 ntBASIC16.58■□□□□ 0.24
Usp47Q8BY87 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Usp47Q8BY87 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms