Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Gm2260-201ENSMUST00000184965 657 ntBASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Gm13996-201ENSMUST00000118456 430 ntBASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Gm24990-201ENSMUST00000157406 323 ntBASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Gm7003-201ENSMUST00000195089 312 ntBASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Gm8913-201ENSMUST00000209491 641 ntBASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Gm45598-202ENSMUST00000210719 986 ntBASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4Q8BQZ5 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4Q8BQZ5 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4Q8BQZ5 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.46□□□□□ -0.58
Cpsf4Q8BQZ5 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Cpsf4Q8BQZ5 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4Q8BQZ5 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Cpsf4Q8BQZ5 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4Q8BQZ5 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4Q8BQZ5 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4Q8BQZ5 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4Q8BQZ5 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4Q8BQZ5 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4Q8BQZ5 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Cpsf4Q8BQZ5 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cpsf4Q8BQZ5 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Gm13296-201ENSMUST00000117854 997 ntBASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Gm14017-201ENSMUST00000121934 386 ntBASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Gm27341-201ENSMUST00000183570 106 ntBASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms